Assay type 'Experimental Assay Type'

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17 Assays visible to you, out of a total of 46

Transcription profiling

CeSGO project

No description specified

Contributor: Cyril Monjeaud

Assay type: Transcriptional Profiling

Technology type: Microarray

Snapshots: No snapshots

Investigation: Detection Of QTL and functional genomics study ...

Study: Detection Of QTL and eQTL with effects on osmor...

Organisms: Oncorhynchus mykiss (chemostat)

SOPs: E-coli extraction protocol

Data files: No Data files

Created: 14th Oct 2016 at 12:58, Last updated: 27th Dec 2017 at 10:13

clinical chemistry analysis

CeSGO project

No description specified

Contributor: Cyril Monjeaud

Assay type: Reactomics

Technology type: Chemostat Measurement

Snapshots: No snapshots

Investigation: Detection Of QTL and functional genomics study ...

Study: Detection Of QTL and eQTL with effects on osmor...

Organisms: Oncorhynchus mykiss (chemostat)

SOPs: No SOPs

Data files: Data day 2, data transformed

Created: 14th Oct 2016 at 13:16, Last updated: 27th Dec 2017 at 10:13

assay1.1.1 feed comparison - microarray exp2

FEED-A-GENE

microarray analysis

Contributor: Francois Moreews

Assay type: Flux Balance Analysis

Technology type: Electrophoresis

Snapshots: No snapshots

Investigation: 1 hidden item

Study: 1 hidden item

Organisms: No organisms

SOPs: No SOPs

Data files: microarray analysis result, phenotype_profil.txt, transcriptomics raw data file

Created: 7th Apr 2017 at 08:46, Last updated: 27th Dec 2017 at 10:13

analyse images test

Bio-imagerie

No description specified

Contributor: Sylvain Prigent

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: 1 hidden item

Study: 1 hidden item

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Created: 13th Nov 2017 at 15:32, Last updated: 27th Dec 2017 at 10:13

Defoliculation nov2017

CORAIL MAD

No description specified

Contributor: Christophe HELIGON

Assay type: Xenopus oocytes enzymatic defoliculation

Technology type: Basic measurement

Snapshots: No snapshots

Investigation: Screening Test SEEK

Study: ACh

Organisms: Xenopus laevis (batch)

SOPs: 1 hidden item

Data files: No Data files

Created: 29th Nov 2017 at 15:24, Last updated: 4th Jan 2018 at 08:41

defoc 2

CORAIL MAD

No description specified

Contributor: Christophe HELIGON

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Screening Test SEEK

Study: ACh

Organisms: Xenopus laevis (batch)

SOPs: 1 hidden item

Data files: No Data files

Created: 29th Nov 2017 at 15:49, Last updated: 27th Dec 2017 at 10:13

defoc 3

CORAIL MAD

No description specified

Contributor: Christophe HELIGON

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Screening Test SEEK

Study: ACh

Organisms: Xenopus laevis (batch)

SOPs: 1 hidden item

Data files: No Data files

Created: 29th Nov 2017 at 15:52, Last updated: 27th Dec 2017 at 10:13

PCR sur plasmides pCS2+_ORs

DEMETER

Réalisation de PCR sur les pCS2+_SlitOR disponible au CRB Xénopes :
OR3 ; OR4 ; OR5 ; OR9; OR11 ; OR13 ; OR15 ; OR16 ; OR18 ; OR20 ; OR22 ; OR23 ; OR24 ; OR27 ; OR28 ; OR314 ; OR35 ; ORco

Contributor: Guillaume Audic

Assay type: Experimental Assay Type

Technology type: PCR

Snapshots: No snapshots

Investigation: Biologie moléculaire

Study: Analyse des plasmides pCS2+

Organisms: No organisms

SOPs: PCR_TaqDNAPolymerase_SOP

Data files: Electrophorèse pCS2+_SlitORs, Forward Primer pCS2+_SlitOR, Reverse Primer pCS2+_SlitOR

Created: 14th May 2018 at 08:24

Séquençage

DEMETER

Séquençage Sanger réalisé par la plateforme de l'IGDR
Utilisation de la technique du BigDye

Contributor: Guillaume Audic

Assay type: DNA Sequencing

Technology type: Sequencing

Snapshots: No snapshots

Investigation: Biologie moléculaire

Study: Analyse des plasmides pCS2+

Organisms: No organisms

SOPs: No SOPs

Data files: Forward Primer pCS2+_SlitOR, Reverse Primer pCS2+_SlitOR, Séquençage pCS2+_SlitOR11, Séquençage pCS2+_SlitOR15, Séquençage pCS2+_SlitOR16, Séquençage pCS2+_SlitOR18, Séquençage pCS2+_SlitOR20, Séquençage pCS2+_SlitOR23, Séquençage pCS2+_SlitOR27, Séquençage pCS2+_SlitOR28, Séquençage pCS2+_SlitOR3, Séquençage pCS2+_SlitOR35, Séquençage pCS2+_SlitOR4, Séquençage pCS2+_SlitOR9, Séquençage pCS2+_SlitORco

Created: 14th May 2018 at 08:52

SlitOR4

DEMETER

Données de criblage obtenues pour l'OR4

Contributor: Guillaume Audic

Assay type: Electrophysiology

Technology type: Two Electrode Voltage Clamp

Snapshots: No snapshots

Investigation: Etude d'expression ovocytaire

Study: Criblage SlitOR vs ligands

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Created: 15th May 2018 at 07:07, Last updated: 15th May 2018 at 07:19

Prélèvement 1

DEMETER

Prélèvement sur femelles (num lot :RRTL251011 TF5)
Date : 28/05/2018

Contributor: Guillaume Audic

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Etude d'expression ovocytaire

Study: Préparation et conservation des ovocytes

Organisms: No organisms

SOPs: Récupération de fragments d'ovaires

Data files: No Data files

Created: 29th May 2018 at 13:03

Défollicularisation

DEMETER

Digestion enzymatique des fragments pour obtenir des ovocytes défolliculés prêts à être injectés

Contributor: Guillaume Audic

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Etude d'expression ovocytaire

Study: Préparation et conservation des ovocytes

Organisms: No organisms

SOPs: 1 hidden item

Data files: No Data files

Created: 29th May 2018 at 13:06

Microinjection d'ovocytes

DEMETER

Microinjection des ovocytes avec de l'ADN SlitOR, coinjecté avec l'ADN SlitORco et un marqueur ADN GFP

Contributor: Guillaume Audic

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Etude d'expression ovocytaire

Study: Préparation et conservation des ovocytes

Organisms: No organisms

SOPs: Microinjection ovocytes X.laevis

Data files: No Data files

Created: 29th May 2018 at 13:08, Last updated: 29th May 2018 at 13:08

Time course analysis of transcription

Test_IFB

https://demo.seek4science.org/investigations/2from

Contributor: Paulette Lieby

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Growth control of the eukaryote cell: a systems...

Study: A time course analysis of transcription respons...

Organisms: No organisms

SOPs: No SOPs

Data files: assay metabolome

Created: 20th Jul 2020 at 13:49

Example Experimental Assay

Test_IFB

from https://fairdomhub.org/assays/521?graph_view=tree

An Experimental Assay is a standardized measurement or diagnostic experiment using a specific protocol, applied to material from a study.
Examples include RNA sequencing, proteomics, metabolomics, and many others.

There are many Experimental Assay Types to choose from, as well as many Technology Type. Moreover, one can create new types in both cases.

Finally, note that one may also associate this assay with one or more organisms, add samples,
...

Contributor: Paulette Lieby

Assay type: Experimental Assay Type

Technology type: Technology Type

Snapshots: No snapshots

Investigation: Demonstration ISA

Study: Example Study

Organisms: No organisms

SOPs: E-coli extraction protocol

Data files: No Data files

Created: 18th Sep 2020 at 12:35, Last updated: 18th Sep 2020 at 13:10