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Created: 29th Nov 2016 at 14:46
Last updated: 22nd Jan 2018 at 10:22
Last used: 11th Apr 2021 at 08:39

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Projects: CeSGO project, EnginesOn project, FEED-A-GENE, Training, CORAIL MAD, Rapsodyn
Institutions: GenOuest, Biogenouest
Disciplines: Bioinformatician
Roles: Not specified
Expertise: Data Management, Software Engineering
Tools: docker, Python, galaxy, Web services, cloud, Workflows
En utilisant les Technologies de l’Information et de la Communication (TIC) ainsi que des logiciels et standards internationaux pour la gestion des métadonnées, l’analyse et le partage de données ainsi que la collaboration scientifique, CeSGO propose la mise en place d’une plate-forme e-Science couplée à un environnement virtuel de recherche centré sur les besoins des communautés des sciences de la vie.
Public web page: https://www.cesgo.org
Organisms: Escherichia coli, Lactococcus lactis, Oncorhynchus mykiss
Euryhalin teleosts can live in freshwater as well as in seawater. The success of their survival depends then on their osmotic acclimation capacities. The objective of my work is to describe acclimation processes in the salted water at the rainbow trout by a study coupling functional genomic and genetic approaches. From a first differential gill transcriptomic study, a list of candidates genes was established. This study also allowed to investigate the physiological answer to a hyperosmotic kinetics
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Snapshots: Snapshot 1, Snapshot 2, Snapshot 3
There is increasing evidence that the ability to adapt to seawater in teleost fish is modulated by genetic factors. Most studies have involved the comparison of species or strains and little is known about the genetic architecture of the trait. To address this question, we searched for QTL affecting osmoregulation capacities after transfer to saline water in a nonmigratory captive-bred population of rainbow trout. A QTL design (5 full-sib families, about 200 F2 progeny each) was produced from a
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Person responsible: Cyril Monjeaud
Snapshots: No snapshots
Investigation: Detection Of QTL and functional genomics study ...
Assays: Transcription profiling, clinical chemistry analysis
Contributor: Cyril Monjeaud
Assay type: Reactomics
Technology type: Chemostat Measurement
Snapshots: No snapshots
Investigation: Detection Of QTL and functional genomics study ...
Study: Detection Of QTL and eQTL with effects on osmor...
Organisms: Oncorhynchus mykiss (chemostat)
SOPs: No SOPs
Data files: Data day 2, data transformed