Example Modelling Analysis
An excellent example can be found https://demo.fairdomhub.org/assays/7?graph_view=tree which shows how a Model can be added to this analysis, together with a model that can be simulated on the fly on https://fair-dom.org/jws-online/.
I actually copy this here and one can run the model from there.
SEEK ID: https://research-sharing.cesgo.org/assays/72
Modelling analysis
Projects: Test_IFB
Investigation: Demonstration ISA
Study: Example Study
Assay position:
Biological problem addressed: Model Analysis Type
Organisms: No organisms
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Created: 18th Sep 2020 at 12:57
Last updated: 18th Sep 2020 at 13:01
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Projects: Test_IFB
Institutions: Institut Français de Bioinformatique
L'objectif de ce projet est d'explorer le concept ISA. L'investigation "Demonstration ISA" est simplement cela : la création d'une structure minimale ISA.
D'autre part je (Paulette) me suis aussi amusée à explorer les fonctionalités SEEK/ISA en copiant une partie du contenu de https://demo.fairdomhub.org/investigations/2, voir https://research-sharing.cesgo.org/investigations/58.
From https://fairdomhub.org/projects/75 : The SEEK is a web interface to a database of research "assets" organised in ...
Public web page: https://www.france-bioinformatique.fr
Comme son nom l'indique, nous allons simplement créer une simple structure/ arbre ISA.
Submitter: Paulette Lieby
Studies: Example Study
Assays: Example Experimental Assay, Example Modelling Analysis
From https://fairdomhub.org/studies/244?graph_view=tree
A Study corresponds to an experiment whose design reflects a specific biological research question. It is part of an Investigation into a particular process, phenomenon or thing. A Study will have Assays that are "measurement experiments", a standardized measurement or diagnostic experiment using a specific protocol, applied to material from a Study.
Submitter: Paulette Lieby
Investigation: Demonstration ISA
Assays: Example Experimental Assay, Example Modelling Analysis
Creator: Paulette Lieby
Submitter: Paulette Lieby
Model type: Not specified
Model format: SBML
Environment: Not specified
